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Organisms:
1
}
Cucumis sativus (cucumber) (id30750)
Organism Information
Name:
Cucumis sativus (cucumber)
Description:
Eukaryota
;
Viridiplantae
;
Streptophyta
;
Embryophyta
;
Tracheophyta
;
Spermatophyta
;
Magnoliophyta
;
eudicotyledons
;
core eudicotyledons
;
rosids
;
eurosids I
;
Cucurbitales
;
Cucurbitaceae
;
Cucumis
;
Tools:
OrganismView
 | 
CodeOn
Search:
 
 
Genomes:
9
Cucumis sativus (cucumber) (vChineseLong_v2, id63504): cds
Cucumis sativus (cucumber) (vChineseLong_v2, id63506): scaffolds
Cucumis sativus (cucumber) (vChineseLong_v2, id63503): whole genome
Cucumis sativus (cucumber) (Cucumis sativus (Chinese Long) w lincRNA predictions) (v2.0, id52080): unmasked
Cucumis sativus (cucumber) (v2, id19927): unmasked
Cucumis sativus (cucumber) (v2, id19928): NCBI WindowMasker (Hard)
Cucumis sativus (cucumber) (v1, id14698): unmasked
Cucumis sativus (cucumber) (v1, id8112): unmasked
Cucumis sativus (cucumber) (v1, id8164): unmasked
Genome Information
Name:
Cucumis sativus (Chinese Long) w lincRNA predictions
Genome ID:
52080
Sequence type:
unmasked: unmasked sequence data (gstid1)
Owner:
Josue Barrera-redondo
Length:
197,268,377 bp
Tools:
GenomeInfo
 | 
OrganismView
 | 
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 | 
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 | 
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Add to GenomeList
Datasets:
3
cucumber_ChineseLong_v2.gff3(v2.0, id128788)
genome.faa(v2.0, id128777)
Csat_lincRNAs.gff3(v1.0, id128789)
Dataset Information
Name:
cucumber_ChineseLong_v2.gff3: Protein coding genes of Cucumis sativus
(id128788)
Source:
Li Z et al. (2011) RNA-Seq improves annotation of protein-coding genes in the cucumber genome. BMC Genomics 12:540 (id4562)
Version:
2.0
Organism:
Cucumis sativus (cucumber)
Created:
2018-08-20 13:26:19
Chromosomes:
0
Total length:
0 bp
Tools:
OrganismView
Chromosomes:
1 (0 bp)
2 (0 bp)
3 (0 bp)
4 (0 bp)
Scaffold000004_5 (0 bp)
5 (0 bp)
6 (0 bp)
7 (0 bp)
Scaffold000044_7 (0 bp)
Scaffold000055_1 (0 bp)
Scaffold000082_1 (0 bp)
Scaffold000098_1 (0 bp)
Scaffold000106_3 (0 bp)
Scaffold000113 (0 bp)
Scaffold000122 (0 bp)
Scaffold000130_1 (0 bp)
Scaffold000137 (0 bp)
Scaffold000139_1 (0 bp)
Scaffold000143_3 (0 bp)
Scaffold000159 (0 bp)
Scaffold000168_1 (0 bp)
Scaffold000171 (0 bp)
Scaffold000174 (0 bp)
Scaffold000179 (0 bp)
Scaffold000182 (0 bp)
Scaffold000185 (0 bp)
Scaffold000187 (0 bp)
Scaffold000188 (0 bp)
Scaffold000191 (0 bp)
Scaffold000195 (0 bp)
Scaffold000196 (0 bp)
Scaffold000197 (0 bp)
Scaffold000199 (0 bp)
Scaffold000200 (0 bp)
Scaffold000201 (0 bp)
Scaffold000202 (0 bp)
Scaffold000205 (0 bp)
Scaffold000211 (0 bp)
Scaffold000214 (0 bp)
Scaffold000216 (0 bp)
Scaffold000217 (0 bp)
Scaffold000221 (0 bp)
Scaffold000222 (0 bp)
Scaffold000225 (0 bp)
Scaffold000230 (0 bp)
Scaffold000231 (0 bp)
Scaffold000232 (0 bp)
Scaffold000234 (0 bp)
Scaffold000235 (0 bp)
Scaffold000237 (0 bp)
Scaffold000238 (0 bp)
Scaffold000244 (0 bp)
Scaffold000248 (0 bp)
Scaffold000251 (0 bp)
Scaffold000256 (0 bp)
Scaffold000258 (0 bp)
Scaffold000260 (0 bp)
Scaffold000268 (0 bp)
Scaffold000271 (0 bp)
Scaffold000272 (0 bp)
Scaffold000276 (0 bp)
Scaffold000284 (0 bp)
Scaffold000296 (0 bp)
Scaffold000299 (0 bp)
Scaffold000304 (0 bp)
Scaffold000308 (0 bp)
Scaffold000310_5 (0 bp)
Scaffold000311 (0 bp)
Scaffold000312 (0 bp)
Scaffold000315 (0 bp)
Scaffold000329 (0 bp)
Scaffold000333 (0 bp)
Scaffold000335 (0 bp)
Scaffold000336 (0 bp)
Scaffold000337 (0 bp)
Scaffold000341 (0 bp)
Scaffold000343 (0 bp)
Scaffold000348 (0 bp)
Scaffold000354 (0 bp)
Scaffold000359 (0 bp)
Scaffold000362 (0 bp)
Scaffold000365 (0 bp)
Scaffold000370 (0 bp)
Scaffold000373 (0 bp)
Scaffold000374 (0 bp)
Scaffold000378 (0 bp)
Scaffold000381 (0 bp)
Scaffold000384 (0 bp)
Scaffold000395 (0 bp)
Scaffold000398 (0 bp)
Scaffold000399 (0 bp)
Scaffold000401 (0 bp)
Scaffold000404 (0 bp)
Scaffold000410 (0 bp)
Scaffold000412 (0 bp)
Chromosome Information
Chromosome ID:
1
Nucleotides:
29,149,675 bp
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Do not generate features for ncRNA genes (CDS genes only)
Include feature annotations (descriptive text; Geneontology; etc)
Ensure that GFF Name tag is unique for each feature
Do not propagate duplicate annotations to children
For GFF "ID" and "Parent" tags, use unique:
Name
Number
Export GFF File