Difference between revisions of "Web Services REST API"
From CoGepedia
m (→2. CoGe Web Services API (RESTful)) |
|||
| Line 1: | Line 1: | ||
| − | + | ==CoGe Web Services RESTful API== | |
| − | + | ||
| − | + | ||
| − | + | CoGe's web services API let's you incorporate CoGe's database of organisms, genomes, and data sets into your web site or pipeline. | |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
Here is our draft API specification document:<br> | Here is our draft API specification document:<br> | ||
Revision as of 16:44, 14 April 2014
CoGe Web Services RESTful API
CoGe's web services API let's you incorporate CoGe's database of organisms, genomes, and data sets into your web site or pipeline.
Here is our draft API specification document:
http://docs.google.com/document/d/1GXOPIVvyTwoGR2IRjDNmdd2nj_6d8db7jx9hG8RxTDc
Below are some examples queries ...
Organism Search
curl http://genomevolution.org/coge/api/v1/organisms/search/col-0
{
"organisms":
[
{
"id": "1",
"name": "Arabidopsis thaliana Col-0 (thale cress)",
"description": "Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis"
}
]
}
Organism Fetch
curl http://genomevolution.org/coge/api/v1/organisms/1
{
"id": 1,
"name": "Arabidopsis thaliana Col-0 (thale cress)",
"description": "Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis"
“genomes” : [ 16911, ... ]
}
Genome Fetch
curl http://genomevolution.org/coge/api/v1/genomes/16911
{
"id": 16911
"name": "",
"description": "",
"version": "10.02",
"link": "",
"restricted": false,
"sequence_type": {
"name": "unmasked",
"description": "unmasked sequence data"
},
"experiments": [31,32,33, ...],
"metadata": [],
}
