Potato-Utricularia-Genlisea Syntenic Depth: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
[[Syntenic depth]] measurements permit classifying the number of whole genome duplications that have happened in one lineage relative to another. Unfortunately, these analyses are not 100% conclusive, but provide supporting evidence, especially when combined with [[Syntenic dotplots]]. | [[Syntenic depth]] measurements permit classifying the number of whole genome duplications that have happened in one lineage relative to another. Unfortunately, these analyses are not 100% conclusive, but provide supporting evidence, especially when combined with [[Syntenic dotplots]]. | ||
==4 genes in 100== | |||
Syntenic Depth: http://genomevolution.org/r/4rl2 | |||
Genlisea aurea | |||
Depth 1 698 of 1000 69.80% | |||
Depth 2 159 of 1000 15.90% | |||
Depth 3 143 of 1000 14.30% | |||
Utricularia gibba | |||
Depth 1 9893 of 19848 49.84% | |||
Depth 2 5103 of 19848 25.71% | |||
Depth 3 2946 of 19848 14.84% | |||
Depth 4 1436 of 19848 7.23% | |||
Depth 5 348 of 19848 1.75% | |||
Depth 6 109 of 19848 0.55% | |||
Depth 7 13 of 19848 0.07% | |||
[[Potato-Utricular-Genlisea Syntenic Depth old data]] | [[Potato-Utricular-Genlisea Syntenic Depth old data]] | ||
Revision as of 18:19, 4 May 2012
Follow this link for information on Syntenic depth.
Syntenic depth measurements permit classifying the number of whole genome duplications that have happened in one lineage relative to another. Unfortunately, these analyses are not 100% conclusive, but provide supporting evidence, especially when combined with Syntenic dotplots.
4 genes in 100
Syntenic Depth: http://genomevolution.org/r/4rl2 Genlisea aurea Depth 1 698 of 1000 69.80% Depth 2 159 of 1000 15.90% Depth 3 143 of 1000 14.30% Utricularia gibba Depth 1 9893 of 19848 49.84% Depth 2 5103 of 19848 25.71% Depth 3 2946 of 19848 14.84% Depth 4 1436 of 19848 7.23% Depth 5 348 of 19848 1.75% Depth 6 109 of 19848 0.55% Depth 7 13 of 19848 0.07%