Difference between revisions of "Plasmodia comparative genomics"
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[[Image:Plasmodium-codon-substitution-matirx.png|thumb|right|600px|Log-odds score substitution matrix of codons between Plasmodium falciparum (x-axis) and Plasmodium knowlesi (y-axis). P. falciparum is a low-GC genome and P. kowlesi is a mid-GC genome.]] | [[Image:Plasmodium-codon-substitution-matirx.png|thumb|right|600px|Log-odds score substitution matrix of codons between Plasmodium falciparum (x-axis) and Plasmodium knowlesi (y-axis). P. falciparum is a low-GC genome and P. kowlesi is a mid-GC genome.]] | ||
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+ | The genomes of two Plasmodium species, falciparum and knowlesi are structurally very similar to one another: | ||
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+ | {| | ||
+ | |Organism || Chromosome count || Genome Length || CDS count || Genome GC content || CDS GC content || CDS Wobble position content || non-coding GC content | ||
+ | |Plasmodium falicparum || 14 || 22,860,235 bp || 5267 || 19.88% || 23.72% || 17.30% || 14.58% | ||
+ | |Plasmodium knowlesi || 14 || 23,462,187 bp || 5102 || 38.94% || 40.23% || 45.56% || 35.12% | ||
+ | } |
Revision as of 12:42, 29 March 2010
The genomes of two Plasmodium species, falciparum and knowlesi are structurally very similar to one another:
Organism | Chromosome count | Genome Length | CDS count | Genome GC content | CDS GC content | CDS Wobble position content | non-coding GC content | Plasmodium falicparum | 14 | 22,860,235 bp | 5267 | 19.88% | 23.72% | 17.30% | 14.58% | Plasmodium knowlesi | 14 | 23,462,187 bp | 5102 | 38.94% | 40.23% | 45.56% | 35.12%
} |