Difference between revisions of "Experiment Metadata"
From CoGepedia
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| − | The experiment metadata file is a tab-separated file containing a header line followed by | + | The experiment metadata file is a tab-separated file containing a header line followed by a metadata line for each experiment. There are some required columns and free-form optional columns. |
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Required Columns: | Required Columns: | ||
| − | * | + | * Filename: the name of the data file for the |
| − | * | + | * Name: the name of the experiment |
Optional Columns (in any order): | Optional Columns (in any order): | ||
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* Version: the version number | * Version: the version number | ||
* Restricted: restrict the data from public access ("yes" or "no", default is no) | * Restricted: restrict the data from public access ("yes" or "no", default is no) | ||
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| + | Note: adding "_link" to the end of the field name denotes a link for another column (i.e., columns "citation" and "citation_link") | ||
Example:<br> | Example:<br> | ||
Revision as of 14:41, 1 May 2014
The experiment metadata file is a tab-separated file containing a header line followed by a metadata line for each experiment. There are some required columns and free-form optional columns.
Required Columns:
- Filename: the name of the data file for the
- Name: the name of the experiment
Optional Columns (in any order):
- Description: a description of the experiment
- Source: the source of the data file (i.e., JGI)
- Version: the version number
- Restricted: restrict the data from public access ("yes" or "no", default is no)
Note: adding "_link" to the end of the field name denotes a link for another column (i.e., columns "citation" and "citation_link")
Example:
Looks like this: http://genomevolution.org/CoGe/ExperimentView.pl?eid=193
