GenomeView examples

Background of chromosome colored green to show GC rich regions and white to show AT rich regions

Gene models drawn as gray arrows

mRNA drawn as blue arrows (on top of gray genes)

Protein coding regions (CDS) drawn as green arrows (on top of gray genes and blue mRNAs)

Overlapping genomic features are detected and expanded to show alternatively spiced transcripts

Genomic region with unsequenced regions colored orange from the genome of Carica papaya

Genomic region with masked sequence colored purple

Microbial (archaea) genomic region with 23S and 16S rRNA genes drawn as wide gray arrows

Microbial (archaea) genomic region with many pseudogenes drawn as orange-red arrows

Wobble GC content colored for Chlamydomonas reinhardtii genome. Green means high GC content in codon wobble positions

Wobble GC content colored for Chlamydomonas reinhardtii chloroplast genome. Red means low GC content in codon wobble positions

Wobble GC content colored for Chlamydomonas reinhardtii mitochondria genome. Yellow means ~50% GC content in codon wobble positions