Difference between revisions of "Creosote"
From CoGepedia
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==[[Syntenic Path Assembly]]== | ==[[Syntenic Path Assembly]]== | ||
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+ | [[File:Master 12185 8400.genomic-CDS.lastz.dag.go c20 D20 g10 A2.aligncoords.gcoords ct0.w1000.ass2.cs1.csoS.nsd.png|thumb|600px|left|Syntenic path assembly with SynMap of creosote (x-axis) and peach (y-axis). Results may be regenerated at: http://genomevolution.org/r/3w95]] |
Revision as of 10:56, 7 August 2011
Assembly
Loading into CoGe
SoapDeNovo assemly: 1,570,116 contigs (370MB): http://genomevolution.org/CoGe/OrganismView.pl?dsgid=12183
Note: too many contigs to process and visualize in SynMap
SoapDeNovo assembly of contigs >= 2000nt: 6,976 contigs (20MB): http://genomevolution.org/CoGe/OrganismView.pl?dsgid=12185