SeqView

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SeqView-display-DNA.png
Showing protein sequence, feature information, and GC content of DNA sequence.

SeqView displays a single sequence in fasta format.

Features:

  • Adding additional of 3' and 5' sequence
  • Generating the reverse complement of the sequence
  • Translating the sequence
  • Extracting all genomic features encompassed by the sequence and sending them to FeatList
  • Calculating GC content of the sequence
  • Information about the feature used to anchoring the retrieved sequence (if applicable)

Links to:

  • ViennaFold for determining RNA secondary structure
  • CoGeBlast for searching genomes with the sequence
  • tRNAView for searching the sequence for tRNAs